I may be misreading this but who dives a pony tank as a backup without a dedicated 1st and 2nd on it? It defeats the purpose of a pony to not have that in place the whole dive.
I think that you are misreading, or maybe I didn't explain it well enough. The question is the difference between two types of redundancy in case of gas source failure.
You are diving with a single AL80 on your back and a slung AL19 pony. Each tank has first and second stage regulators on it.
An LP hose blows on your AL80, or some other unfixable reg failure. Normally,
this can drain a tank in a little over a minute, but let's say you are quick and reach behind you, and shut down your tank valve while deploying your pony. So even though you saved some gas in your AL80, now you have only 19 CUF of gas to breathe. The only way to access the gas in the AL80 would be to doff your rig, take the first stage off the AL80, breathe the pony down, and then while holding your breath take the first stage off the pony and attach it to the 80. You also would need to service both regs, but that's less important right now.
Now say you are diving manifolded doubles, and the same thing happens. You shut down the valve on the side of the failure, and breath from the reg on the other post. You still have access to your entire gas supply in both of your tanks.
You might say that you don't care about the extra gas, you have enough in the pony to get you to the surface. Fair enough, but it's always better to have more gas, for a slower and safer ascent. And since this is the advanced diving forum, it's also fair to consider the fact that you might want more gas if you have a deco obligation. While you could alternate your gear configuration depending on whether you were doing deco or not, it's nice to just have one configuration. Small manifolded doubles (which is what started this conversation) is a nice way of having good redundancy when you don't want to bring a big set of double tanks. That's all I'm saying. The manifold lets you get access to all of your gas in case of a reg failure. I have no major problem with single tank and pony, this is just an alternative with one advantage.