It seems Feb 6th and later is safe from holiday disruption, and this is earlier than I would have traveled anyway.
The cost of a Philippines trip is only marginally less than the cost of an Indonesian trip. The reason I choose Philippines is shorter flight times. From the airline schedules, that was a mistake. If I can't save more than a hour or so, I am going to Komodo in June.
I don't know where you are in the US. For me, I researched departures from West Coast airports (a bit easier for me). There are nonstops to Manila from LAX and SFO (Philippines Airlines and United Airlines), and one-stops from LAX, SFO, and SEA (many carriers). I got a $800 r/t from LAX (connection in Taipei) in basic economy, and another fee for seat selection (about $60 if I want to select a seat in advance). Not counting getting to LAX, it's about 16-18 hrs for LAX-MNL (with about 13 hrs on the LAX-TPE leg). The nonstops are about 13 hrs, but the price was closer to $1200 for my timeframe.
I did look at Indonesia pre-pandemic--it was going to be close to 24 hrs LAX to, say, Manado airport in North Sulawesi. Admittedly, the land transfer in some parts of Indonesia does look a lot less painful than Manila to Puerto Galera.
Once I'm in MNL, the resort is happy to arrange a private van transfer for you (for $$$). Or, if you feel comfortable doing it yourself, the pinned post at the top of the forum has discussions on taking bus-and-ferry to Puerto Galera. I researched many youtube videos on how to avoid getting ripped off by taxis in Manila, and on getting from a Manila bus station to Puerto Galera via bus and ferry. I'm pretty comfortable doing public-ish transit; I've done quite a bit of public transit transfers in first world countries (Japan, Spain, Portugal), and some third world (/sarc on) such as Portland OR or Chicago IL (/sarc off). I figure about 1 working day for the transfer MNL to Puerto Galera. I will want a full night's sleep when I arrive in the Philippines. I've built in an extra day for the return--where I live, I have to stay overnight either in MNL or in LAX before I make it back home.
Best of luck planning your trip, and have fun!