No. The CO is not fine. There should be zero. None. While the values are within the crappy limits that CGA allows, the values also indicate there is a problem with the supplied air. I worked in a lab that dealt with this sort of thing and I've run thousands of samples of breathing air and other breathing gases. The numbers posted are not good. There is something going on with the fill system and I would expect a strong likelihood that a deeper analysis would find other issues.CO looks 'fine' (much below 10 ppm). The CO2 in the 50% probably wouldn't be noticeable at deco depths ≤20m ('1800ppm' equivalent at 3x pressure?). Might be common in nitrox membrane systems that concentrate heavier ambient gases (O2, CO2, argon)
Is there any precedent for deep commercial/sat divers to pass out on deck after rapid ascents that skip in-water Buhlmann decompression? I was under the impression they just strip down and walk themselves into a chamber. But maybe you don't here about the others.
And the CO2 is also not fine. The issue with the fatality and all the other stuff that went on probably isn't related to the breathing gas, but I am alarmed at what the Navy found out. Whoever filled those tanks has one shisty fill system. I hope they aren't around anymore.