We were in Roatan last December, and it literally poured rain non-stop... And I'm talking typhoon-type rains like I've never seen before. We were in West End (Hotel Chillies/Native Sons Diving). While we loved the hotel, the diving was horrible. Native Sons normally does a beach loading in front of the hotel. Because the wind was up, they trucked us (literally, a pick up truck) to the other side of the hotel. The dock there was in some shack's back yard where we waded through mud and garbage to load up their 24' centre console, which was fine as we were pretty much the only four there.
While we had a couple of decent dives, the crew kept wanting to take us towards the cruise ship pier where there was horrible run-off. The vis was crap, but the reef (and I use the term loosely) was dead or dying. One one occasion, I told our DM to PLEASE take us elsewhere, but they were insistent. I called the dive after 15 minutes. I got the distinct feeling the DMs really didn't want to be there so took us to sh!t sites to discourage us from diving. (Pfft, not happening). As a comical side-note, our boat captain who was the owner's son I believe) was a nice guy, but seemed unable to dock our boat after the dive. There was something of a cross breeze and on several days, he actually jumped out of the boat and pushed us in to the dock. Along the same lines, our female DM (in an attempt to show off I think) tossed her gear out of the boat, where she was going to don it I guess. Great plan, except it all sunk to the bottom, in about 30 feet of water. The other DM (her husband) hopped in, retrieved the gear and brought it up. His wife proceeded to freak out because he'd neglected to do a safety stop after his 30', 45 second dive. PADI quality DM right there. I imagine she was a Utila "Zero to hero" DM...
Anyway, I think the weather we got was exceptionally bad, and we're actually looking at going back this year, but to somewhere with a dock. ;-)