No one goes after WW2 wrecks in Greece for metal. That kind of operation would result in the Hellenic Navy showing up in no time.
Greece is a signatory for UNESCO.
But UNESCO doesn't protect anything. Countries do, and that all depends on will and resources.
Given the number of islands in the Aegean (most uninhabited), unless you are monitoring everything from satellites, there is simply no way to monitor all areas, as there are reported and unreported shipwrecks whose areas are closed for diving. Super easy to drop off divers. Now I've done it, but I had paperwork registered with the Hellenic Coast Guard that authorized my solo diving. But I don't think I would have been caught had I been diving illegally.
People are getting caught every week in possession of antiquities, but how many are not caught? It is just a lucrative business, like narcotics, just without the violence.